1.miRNA detail image
2.Location informaition
| Type | Chromosome | Start | End | Strand | SNP(TSS up 2kb) | SNP(gene body) |
| mature | chr07 | 8092841 | 8092861 | + | ||
| precursor | chr07 | 8092825 | 8092932 | + | more details in SorGSD | more details in SorGSD |
3.miRNA sequence
GCAUGCUCUCUC
4.Target gene
| Target gene | Expectation | UPE | miRNA_aligned start-end | Target_aligned start-end | Aligned Fragment: miRNA-Target |
| Sobic.003G362300 | 2.0 | 18.338 | 20-1 | 123-142 | AUCGUACGAGGAGGGUUCUU |=||=|||||||||||=||| UCGCGUGCUCCUCCCAGGAA |
| Sobic.005G133900 | 3.0 | 19.513 | 20-1 | 631-650 | AUCGUACGAGGAGGGUUCUU *||||||||=|||||=|||= AAGCAUGCUUCUCCCGAGAC |
| Sobic.003G227300 | 3.0 | 15.996 | 21-1 | 1146-1166 | GAUCGUACGAGGAGGGUUCUU ||||||||=||||*|||||*| CUAGCAUGUUCCUGCCAAGUA |
| Sobic.003G339900 | 2.0 | 20.249 | 20-1 | 415-434 | AUCGUACGAGGAGGGUUCUU |*|*|||||||||||||||| UUGAAUGCUCCUCCCAAGAA |
| Sobic.002G046300 | 3.0 | 16.276 | 20-1 | 705-724 | AUCGUACGAGGAGGGUUCUU *=||||||||*|=||||||| AGGCAUGCUCGUUCCAAGAA |
| Sobic.001G277500 | 3.0 | 20.735 | 21-1 | 1234-1254 | GAUCGUACGAGGAGGGUUCUU =|=|*|||||*|||=|||||| UUGGGAUGCUGCUCUCAAGAA |
| Sobic.001G277500 | 3.0 | 20.735 | 21-1 | 1273-1293 | GAUCGUACGAGGAGGGUUCUU =|=|*|||||*|||=|||||| UUGGGAUGCUGCUCUCAAGAA |
| Sobic.003G050000 | 3.0 | 20.077 | 20-1 | 975-994 | AUCGUACGAGGAGGGUUCUU |||=|||*|=|*|||||||| UAGUAUGGUUCACCCAAGAA |
| Sobic.002G059200 | 3.0 | 15.812 | 19-1 | 610-629 | UCGUACGAGGA-GGGUUCUU ||==|||||||*|||||||| AGUGUGCUCCUGCCCAAGAA |
5.Secondary structure
 |
6.GSE32458
7.GSE49879
| null |