1.miRNA detail image
2.Location informaition
| Type | Chromosome | Start | End | Strand | SNP(TSS up 2kb) | SNP(gene body) |
| mature | chr01 | 40668750 | 40668770 | - | ||
| precursor | chr01 | 40668680 | 40668778 | - | more details in SorGSD | more details in SorGSD |
3.miRNA sequence
GUU
4.Target gene
| Target gene | Expectation | UPE | miRNA_aligned start-end | Target_aligned start-end | Aligned Fragment: miRNA-Target |
| Sobic.001G451200 | 2.0 | 18.298 | 21-1 | 2914-2934 | CGGAACCGACUAGGUUUGUCC |||*|*||||||||||||||| GCCCUAGCUGAUCCAAACAGG |
| Sobic.001G451200 | 2.0 | 18.298 | 21-1 | 2841-2861 | CGGAACCGACUAGGUUUGUCC |||*|*||||||||||||||| GCCCUAGCUGAUCCAAACAGG |
| Sobic.004G112100 | 3.0 | 21.523 | 20-1 | 1068-1087 | GGAACCGACUAGGUUUGUCC ||||*|=|||||||||=||* CCUUAGUUGAUCCAAAUAGA |
| Sobic.006G179900 | 3.0 | 22.186 | 20-1 | 955-974 | GGAACCGACUAGGUUUGUCC |=||||||||*===|||||| CUUUGGCUGAAUUGAACAGG |
| Sobic.006G179900 | 3.0 | 22.186 | 20-1 | 958-977 | GGAACCGACUAGGUUUGUCC |=||||||||*===|||||| CUUUGGCUGAAUUGAACAGG |
| Sobic.005G068100 | 3.0 | 21.731 | 19-1 | 1753-1772 | GAACCGAC-UAGGUUUGUCC =|||||||*|||=||||||| UUUGGCUGCAUCUAAACAGG |
| Sobic.001G497800 | 3.0 | 16.375 | 20-1 | 1753-1771 | GGAACCGACUAGGUUUGUCC |||*||*||||||||||||| CCUAGG-UGAUCCAAACAGG |
5.Secondary structure
 |
6.GSE32458
7.GSE49879
| null |