1.miRNA detail image
2.Location informaition
| Type | Chromosome | Start | End | Strand | SNP(TSS up 2kb) | SNP(gene body) |
| mature | chr09 | 58906743 | 58906763 | + | ||
| precursor | chr09 | 58906738 | 58906842 | + | more details in SorGSD | more details in SorGSD |
3.miRNA sequence
AGGCAAUGC
4.Target gene
| Target gene | Expectation | UPE | miRNA_aligned start-end | Target_aligned start-end | Aligned Fragment: miRNA-Target |
| Sobic.005G027900 | 0.0 | 23.013 | 21-1 | 101-121 | AGUUCGACAAGCUGCUUAACG ||||||||||||||||||||| UCAAGCUGUUCGACGAAUUGC |
| Sobic.005G026500 | 0.5 | 21.436 | 21-1 | 101-121 | AGUUCGACAAGCUGCUUAACG |||||||||||||||=||||| UCAAGCUGUUCGACGGAUUGC |
| Sobic.005G027700 | 0.5 | 23.65 | 21-1 | 101-121 | AGUUCGACAAGCUGCUUAACG ||||||||||=|||||||||| UCAAGCUGUUUGACGAAUUGC |
| Sobic.005G026900 | 0.5 | 21.67 | 21-1 | 101-121 | AGUUCGACAAGCUGCUUAACG |||||||||||||||=||||| UCAAGCUGUUCGACGGAUUGC |
| Sobic.005G027600 | 1.0 | 22.761 | 21-1 | 101-121 | AGUUCGACAAGCUGCUUAACG |*||||||||||||||||||| UGAAGCUGUUCGACGAAUUGC |
| Sobic.005G011000 | 1.5 | 18.418 | 21-1 | 104-124 | AGUUCGACAAGCUGCUUAACG |||||||||||||||||||=| UCAAGCUGUUCGACGAAUUUC |
| Sobic.005G027800 | 1.5 | 21.248 | 21-1 | 101-121 | AGUUCGACAAGCUGCUUAACG |*|||||||||||=||||||| UGAAGCUGUUCGAUGAAUUGC |
| Sobic.002G054100 | 1.5 | 24.199 | 21-1 | 251-271 | AGUUCGACAAGCUGCUUAACG ||=|=|||||||||||||||| UCGAUCUGUUCGACGAAUUGC |
| Sobic.004G346200 | 1.5 | 24.416 | 20-1 | 681-700 | GUUCGACAAGCUGCUUAACG ||||||||||||||||*||| CAAGCUGUUCGACGAAAUGC |
| Sobic.006G198900 | 2.0 | 19.883 | 21-1 | 466-486 | AGUUCGACAAGCUGCUUAACG |||||*|||||||||=||||= UCAAGAUGUUCGACGGAUUGU |
| Sobic.002G142700 | 2.5 | 19.853 | 21-1 | 907-927 | AGUUCGACAAGCUGCUUAACG |=||||||||=||||||*||| UUAAGCUGUUUGACGAAAUGC |
| Sobic.008G190600 | 2.0 | 20.769 | 20-1 | 91-110 | GUUCGACAAGCUGCUUAACG |=||||||||||||||*||| CGAGCUGUUCGACGAAAUGC |
| Sobic.001G391100 | 2.0 | 18.395 | 20-1 | 489-508 | GUUCGACAAGCUGCUUAACG ||||=|||||||||||*||| CAAGUUGUUCGACGAAAUGC |
| Sobic.005G168000 | 1.5 | 18.628 | 20-1 | 554-573 | GUUCGACAAGCUGCUUAACG |=|*|||||||||||||||| CGACCUGUUCGACGAAUUGC |
| Sobic.007G087900 | 2.5 | 17.088 | 21-1 | 448-468 | AGUUCGACAAGCUGCUUAACG |*|||||||||||||||*||| UGAAGCUGUUCGACGAAAUGC |
| Sobic.007G087900 | 2.5 | 17.088 | 21-1 | 448-468 | AGUUCGACAAGCUGCUUAACG |*|||||||||||||||*||| UGAAGCUGUUCGACGAAAUGC |
| Sobic.007G087900 | 2.5 | 17.088 | 21-1 | 448-468 | AGUUCGACAAGCUGCUUAACG |*|||||||||||||||*||| UGAAGCUGUUCGACGAAAUGC |
| Sobic.007G087900 | 2.5 | 17.088 | 21-1 | 448-468 | AGUUCGACAAGCUGCUUAACG |*|||||||||||||||*||| UGAAGCUGUUCGACGAAAUGC |
| Sobic.010G138700 | 2.5 | 20.305 | 20-1 | 153-172 | GUUCGACAAGCUGCUUAACG ||=|||||||||||||*||= CAGGCUGUUCGACGAAAUGU |
| Sobic.003G276800 | 3.0 | 21.525 | 21-1 | 724-744 | AGUUCGACAAGCUGCUUAACG |*|=|||||||||||||*||| UGAGGCUGUUCGACGAAAUGC |
| Sobic.005G028300 | 3.0 | 17.976 | 21-1 | 452-472 | AGUUCGACAAGCUGCUUAACG |*|||||||||||=|||*||| UGAAGCUGUUCGAUGAAAUGC |
| Sobic.005G028300 | 3.0 | 17.976 | 21-1 | 483-503 | AGUUCGACAAGCUGCUUAACG |*|||||||||||=|||*||| UGAAGCUGUUCGAUGAAAUGC |
| Sobic.001G267500 | 3.0 | 21.393 | 21-1 | 934-954 | AGUUCGACAAGCUGCUUAACG ||||||||||=||*|||*||| UCAAGCUGUUUGAAGAAAUGC |
| Sobic.007G046700 | 3.0 | 20.403 | 20-1 | 840-859 | GUUCGACAAGCUGCUUAACG *=||||||||||||||*||| GGAGCUGUUCGACGAAAUGC |
| Sobic.004G213700 | 2.5 | 19.015 | 20-1 | 885-904 | GUUCGACAAGCUGCUUAACG *|||*|||||||=||||||| GAAGGUGUUCGAUGAAUUGC |
| Sobic.002G198900 | 3.0 | 22.727 | 20-1 | 489-508 | GUUCGACAAGCUGCUUAACG *=||||||||||||||*||| GGAGCUGUUCGACGAAAUGC |
| Sobic.001G462400 | 2.5 | 19.674 | 20-1 | 804-823 | GUUCGACAAGCUGCUUAACG |||||||*||||||||*||| CAAGCUGCUCGACGAAAUGC |
| Sobic.003G394500 | 2.5 | 19.077 | 20-1 | 657-676 | GUUCGACAAGCUGCUUAACG ==||*|||||||=||||||| UGAGGUGUUCGAUGAAUUGC |
| Sobic.001G490600 | 3.0 | 20.553 | 20-1 | 98-117 | GUUCGACAAGCUGCUUAACG *=|*|||||||||||||||| GCACCUGUUCGACGAAUUGC |
| Sobic.008G034900 | 3.0 | 22.401 | 21-1 | 1628-1648 | AGUUCGACAAGCUGCUUAACG ||=||=||||*||=||||||| UCCAGUUGUUGGAUGAAUUGC |
| Sobic.005G096500 | 2.5 | 23.585 | 20-1 | 402-421 | GUUCGACAAGCUGCUUAACG |=|*|||*|||||||||||| CGACCUGCUCGACGAAUUGC |
| Sobic.005G171800 | 3.0 | 23.699 | 20-1 | 545-564 | GUUCGACAAGCUGCUUAACG |=||*|||||||||||*||| CGAGGUGUUCGACGAAAUGC |
| Sobic.004G266300 | 3.0 | 19.69 | 20-1 | 547-566 | GUUCGACAAGCUGCUUAACG |=|*||||||||||||||*| CGACCUGUUCGACGAAUUCC |
| Sobic.002G290000 | 3.0 | 17.642 | 20-1 | 1794-1813 | GUUCGACAAGCUGCUUAACG ||||=||||*|||*|||||| CAAGUUGUUGGACAAAUUGC |
| Sobic.005G019200 | 3.0 | 20.485 | 20-1 | 1270-1289 | GUUCGACAAGCUGCUUAACG |||*|||||=||||||*||| CAAACUGUUUGACGAAAUGC |
| Sobic.004G212000 | 3.0 | 20.001 | 20-1 | 1234-1253 | GUUCGACAAGCUGCUUAACG |=||=|||||*|*||||||| CGAGUUGUUCCAAGAAUUGC |
| Sobic.004G212000 | 3.0 | 20.001 | 20-1 | 1234-1253 | GUUCGACAAGCUGCUUAACG |=||=|||||*|*||||||| CGAGUUGUUCCAAGAAUUGC |
| Sobic.004G205500 | 3.0 | 24.745 | 20-1 | 894-913 | GUUCGACAAGCUGCUUAACG |=||*||*||||||=||||| CGAGGUGCUCGACGGAUUGC |
5.Secondary structure
 |
6.GSE32458
7.GSE49879
| null |