1.miRNA detail image
2.Location informaition
| Type | Chromosome | Start | End | Strand | SNP(TSS up 2kb) | SNP(gene body) |
| mature | chr05 | 60202651 | 60202672 | + | ||
| precursor | chr05 | 60202646 | 60202752 | + | more details in SorGSD | more details in SorGSD |
3.miRNA sequence
UCACCCAUGUC
4.Target gene
| Target gene | Expectation | UPE | miRNA_aligned start-end | Target_aligned start-end | Aligned Fragment: miRNA-Target |
| Sobic.005G030900 | 1.0 | 19.138 | 22-1 | 89-110 | ACAAGCUGCUUAACGAAGGGGU ||||||||||=|||||||=||| UGUUCGACGAGUUGCUUCUCCA |
| Sobic.005G030800 | 1.0 | 19.138 | 22-1 | 526-547 | ACAAGCUGCUUAACGAAGGGGU ||||||||||=|||||||=||| UGUUCGACGAGUUGCUUCUCCA |
| Sobic.005G027600 | 1.5 | 21.492 | 22-1 | 107-128 | ACAAGCUGCUUAACGAAGGGGU ||||||||||||||||||*||| UGUUCGACGAAUUGCUUCACCA |
| Sobic.005G027900 | 1.5 | 22.622 | 22-1 | 107-128 | ACAAGCUGCUUAACGAAGGGGU |||||||||||||||||||*|| UGUUCGACGAAUUGCUUCCGCA |
| Sobic.002G054100 | 2.0 | 23.842 | 22-1 | 257-278 | ACAAGCUGCUUAACGAAGGGGU ||||||||||||||||||*||= UGUUCGACGAAUUGCUUCACCG |
| Sobic.005G026500 | 2.0 | 20.988 | 22-1 | 107-128 | ACAAGCUGCUUAACGAAGGGGU |||||||||=|||||||*|||| UGUUCGACGGAUUGCUUACCCA |
| Sobic.005G026900 | 2.0 | 20.749 | 22-1 | 107-128 | ACAAGCUGCUUAACGAAGGGGU |||||||||=|||||||*|||| UGUUCGACGGAUUGCUUACCCA |
| Sobic.005G024600 | 2.0 | 24.765 | 22-1 | 107-128 | ACAAGCUGCUUAACGAAGGGGU |||||||=||||||||*||||| UGUUCGAUGAAUUGCUGCCCCA |
| Sobic.004G213700 | 2.5 | 21.167 | 22-1 | 890-911 | ACAAGCUGCUUAACGAAGGGGU |||||||=||||||||||==== UGUUCGAUGAAUUGCUUCUUUG |
| Sobic.005G027800 | 2.5 | 20.121 | 22-1 | 107-128 | ACAAGCUGCUUAACGAAGGGGU |||||||=|||||||||*=||| UGUUCGAUGAAUUGCUUAUCCA |
| Sobic.005G027700 | 2.5 | 23.267 | 22-1 | 107-128 | ACAAGCUGCUUAACGAAGGGGU ||||=||||||||||||||*|= UGUUUGACGAAUUGCUUCCGCG |
| Sobic.005G028300 | 3.0 | 14.953 | 22-1 | 458-479 | ACAAGCUGCUUAACGAAGGGGU |||||||=|||*|||||*|||| UGUUCGAUGAAAUGCUUACCCA |
| Sobic.007G087900 | 3.0 | 15.792 | 22-1 | 454-475 | ACAAGCUGCUUAACGAAGGGGU |||||||||||*|||||*||=| UGUUCGACGAAAUGCUUACCUA |
| Sobic.007G087900 | 3.0 | 15.792 | 22-1 | 454-475 | ACAAGCUGCUUAACGAAGGGGU |||||||||||*|||||*||=| UGUUCGACGAAAUGCUUACCUA |
| Sobic.005G028300 | 3.0 | 14.953 | 22-1 | 489-510 | ACAAGCUGCUUAACGAAGGGGU |||||||=|||*|||||*|||| UGUUCGAUGAAAUGCUUACCCA |
| Sobic.007G087900 | 3.0 | 15.792 | 22-1 | 454-475 | ACAAGCUGCUUAACGAAGGGGU |||||||||||*|||||*||=| UGUUCGACGAAAUGCUUACCUA |
| Sobic.007G087900 | 3.0 | 15.792 | 22-1 | 454-475 | ACAAGCUGCUUAACGAAGGGGU |||||||||||*|||||*||=| UGUUCGACGAAAUGCUUACCUA |
| Sobic.005G028200 | 2.0 | 15.633 | 22-1 | 260-281 | ACAAGCUGCUUAACGAAGGGGU |*||||||**|||||||||||| UAUUCGACCUAUUGCUUCCCCA |
| Sobic.001G216400 | 3.0 | 23.281 | 21-1 | 73-93 | CAAGCUGCUUAACGAAGGGGU |*||||||*=||||||||=|| GAUCGACGUGUUGCUUCCUCA |
| Sobic.009G146000 | 3.0 | 17.598 | 21-1 | 5660-5680 | CAAGCUGCUUAACGAAGGGGU ||||||*|||||*|||==||| GUUCGAAGAAUUCCUUUUCCA |
| Sobic.003G252200 | 3.0 | 12.334 | 22-1 | 6906-6927 | ACAAGCUGCUUAACGAAGGGGU |*|||*|||||||||||*|=|| UCUUCAACGAAUUGCUUACUCA |
| Sobic.003G252200 | 3.0 | 12.334 | 22-1 | 6999-7020 | ACAAGCUGCUUAACGAAGGGGU |*|||*|||||||||||*|=|| UCUUCAACGAAUUGCUUACUCA |
| Sobic.010G209400 | 3.0 | 13.135 | 22-1 | 764-786 | ACAAGC-UGCUUAACGAAGGGGU |*||||*|=||||||||||=||| UAUUCGUAUGAAUUGCUUCUCCA |
| Sobic.010G209400 | 3.0 | 13.135 | 22-1 | 764-786 | ACAAGC-UGCUUAACGAAGGGGU |*||||*|=||||||||||=||| UAUUCGUAUGAAUUGCUUCUCCA |
| Sobic.010G209400 | 3.0 | 13.135 | 22-1 | 764-786 | ACAAGC-UGCUUAACGAAGGGGU |*||||*|=||||||||||=||| UAUUCGUAUGAAUUGCUUCUCCA |
| Sobic.005G033000 | 3.0 | 16.62 | 20-1 | 91-110 | AAGCUGCUUAACGAAGGGGU ||||=|||*|||*|||||=| UUCGGCGAUUUGAUUCCCUA |
5.Secondary structure
 |
6.GSE32458
7.GSE49879
| null |