1.miRNA detail image
2.Location informaition
| Type | Chromosome | Start | End | Strand | SNP(TSS up 2kb) | SNP(gene body) |
| mature | chr01 | 71476774 | 71476794 | - | ||
| precursor | chr01 | 71476711 | 71476794 | - | more details in SorGSD | more details in SorGSD |
3.miRNA sequence
4.Target gene
| Target gene | Expectation | UPE | miRNA_aligned start-end | Target_aligned start-end | Aligned Fragment: miRNA-Target |
| Sobic.001G044600 | 2.5 | 24.123 | 21-1 | 18-38 | GAGGAGACGUACGGGGAAGGU ||||||*||||||=||||||* CUCCUCCGCAUGCUCCUUCCU |
| Sobic.008G097800 | 3.0 | 4.883 | 21-1 | 14-34 | GAGGAGACGUACGGGGAAGGU ||||||||||||||*=||==| CUCCUCUGCAUGCCAUUUUUA |
| Sobic.003G353200 | 3.0 | 15.109 | 21-1 | 126-146 | GAGGAGACGUACGGGGAAGGU ||=|||*|||||=|||||||* CUUCUCCGCAUGUCCCUUCCU |
| Sobic.001G159900 | 2.5 | 6.332 | 21-1 | 314-334 | GAGGAGACGUACGGGGAAGGU |||||||||=|*|=||||||| CUCCUCUGCCUCCUCCUUCCA |
| Sobic.010G126200 | 3.0 | 7.736 | 20-1 | 1172-1191 | AGGAGACGUACGGGGAAGGU *|=|=||||||||||||||= ACUUUUGCAUGCCCCUUCCC |
| Sobic.005G198500 | 3.0 | 21.595 | 20-1 | 83-102 | AGGAGACGUACGGGGAAGGU |||||||==||=||||||=* UCCUCUGUGUGUCCCUUCUU |
| Sobic.001G108900 | 3.0 | 18.989 | 20-1 | 1871-1890 | AGGAGACGUACGGGGAAGGU *|||||||=||||==||=|| GCCUCUGCGUGCCUUUUUCA |
| Sobic.001G451200 | 3.0 | 19.417 | 21-1 | 3190-3210 | GAGGAGACGUACGGGGAAGGU ||*|||||||||=*||||=|| CUGCUCUGCAUGUGCCUUUCA |
| Sobic.001G451200 | 3.0 | 19.417 | 21-1 | 3263-3283 | GAGGAGACGUACGGGGAAGGU ||*|||||||||=*||||=|| CUGCUCUGCAUGUGCCUUUCA |
| Sobic.002G131300 | 3.0 | 15.335 | 21-1 | 1347-1367 | GAGGAGACGUACGGGGAAGGU ||*||||=||||||=|||=|| CUGCUCUUCAUGCCUCUUUCA |
| Sobic.007G166600 | 2.5 | 17.733 | 21-1 | 379-399 | GAGGAGACGUACGGGGAAGGU =|||||*|||*||||=||||| UUCCUCCGCACGCCCUUUCCA |
| Sobic.010G269400 | 2.5 | 7.629 | 21-1 | 122-142 | GAGGAGACGUACGGGGAAGGU =|=||||||=|=||||||||| UUUCUCUGCCUUCCCCUUCCA |
| Sobic.002G345800 | 2.5 | 14.53 | 21-1 | 713-732 | GAGGAGACGUACGGGGAAGGU |||||||||*||||||||||= CUCCUCUGC-UGCCCCUUCCG |
| Sobic.002G169700 | 3.0 | 23.316 | 20-1 | 5073-5092 | AGGAGACGUACGGGGAAGGU *|||||=||||=||=||||| GCCUCUUCAUGUCCUUUCCA |
| Sobic.006G080400 | 3.0 | 11.068 | 21-1 | 899-919 | GAGGAGACGUACGGGGAAGGU =|||*||||*||||=|||=|| UUCCACUGCUUGCCUCUUUCA |
| Sobic.006G002600 | 3.0 | 13.748 | 21-1 | 220-240 | GAGGAGACGUACGGGGAAGGU |||||||=|*|*||||||||| CUCCUCUUCUUCCCCCUUCCA |
| Sobic.006G034400 | 2.5 | 23.845 | 19-1 | 694-713 | GGAGACG-UACGGGGAAGGU |||||||*|||||||||=|| CCUCUGCUAUGCCCCUUUCA |
| Sobic.001G470100 | 3.0 | 16.528 | 20-1 | 755-774 | AGGAGACGUACGGGGAAGGU ||||||||**|=||=||||| UCCUCUGCUCGUCCUUUCCA |
5.Secondary structure
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6.GSE32458
7.GSE49879
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