1.miRNA detail image
2.Location informaition
| Type | Chromosome | Start | End | Strand | SNP(TSS up 2kb) | SNP(gene body) |
| mature | chr04 | 58034695 | 58034715 | + | ||
| precursor | chr04 | 58034693 | 58034815 | + | more details in SorGSD | more details in SorGSD |
3.miRNA sequence
CCGGCAGGUUCUUCUCUUUGGCUACAC
4.Target gene
| Target gene | Expectation | UPE | miRNA_aligned start-end | Target_aligned start-end | Aligned Fragment: miRNA-Target |
| Sobic.001G486000 | 2.5 | 18.564 | 21-1 | 1072-1092 | GGCCGUUCAGUAGGAACCGAU |=|||||*||||||||||||* CUGGCAACUCAUCCUUGGCUU |
| Sobic.001G486000 | 2.5 | 18.564 | 21-1 | 1116-1136 | GGCCGUUCAGUAGGAACCGAU |=|||||*||||||||||||* CUGGCAACUCAUCCUUGGCUU |
| Sobic.002G370800 | 2.5 | 16.408 | 20-1 | 1206-1225 | GCCGUUCAGUAGGAACCGAU =|||||*||||||||||||* UGGCAACUCAUCCUUGGCUU |
| Sobic.002G038500 | 2.5 | 20.601 | 20-1 | 1209-1228 | GCCGUUCAGUAGGAACCGAU ||||||*||||=|||||||= CGGCAACUCAUUCUUGGCUC |
| Sobic.002G038500 | 2.5 | 20.601 | 20-1 | 1218-1237 | GCCGUUCAGUAGGAACCGAU ||||||*||||=|||||||= CGGCAACUCAUUCUUGGCUC |
| Sobic.004G316500 | 3.0 | 15.042 | 21-1 | 1106-1126 | GGCCGUUCAGUAGGAACCGAU |*|||||=||||||||||||* CAGGCAAUUCAUCCUUGGCUU |
| Sobic.001G083000 | 3.0 | 21.735 | 21-1 | 1448-1468 | GGCCGUUCAGUAGGAACCGAU |||*||||||*|||||||||* CCGCCAAGUCUUCCUUGGCUU |
| Sobic.008G174600 | 3.0 | 17.844 | 20-1 | 802-821 | GCCGUUCAGUAGGAACCGAU *|||||*||||=|||||||= AGGCAAAUCAUUCUUGGCUG |
| Sobic.001G154500 | 3.0 | 24.321 | 20-1 | 1581-1600 | GCCGUUCAGUAGGAACCGAU *|||||*||||=|||||||= AGGCAAAUCAUUCUUGGCUG |
5.Secondary structure
 |
6.GSE32458
7.GSE49879
| null |