Menu
Coexpression Network
Module Enrichment
Network Comparison
UCSC Browser
Cis-element Analysis
Gene Sets Analysis
Quick Search
Blast Search
Annotation Summary
Help & Contact
Co-expression network analysis
I. Select sepcies for network analysis:
G.arboreum    
G.hirsutum
II. Select analysis type for network analysis:
Global Network
1.One interested gene search:
(
e.g.Cotton_A_07947,Cotton_A_18089,Cotton_A_11862
)
Positive
Negative
Protein-Protein interaction
2.List of interested genes search:
Example:
cotton
Positive
Negative
Protein-Protein interaction
Tissue preferential analysis
1.One interested gene search:
seedling
root
stem
leaf
seed
fiber
(
e.g.Cotton_A_07947
)
Positive
Negative
Protein-Protein interaction
2.List of interested genes search:
seedling
root
stem
leaf
seed
fiber
Example:
cotton
Positive
Negative
Protein-Protein interaction
Stress differential analysis
1.One interested gene search:
root
stem
leaf
treat: PEG vs CK
treat: NaCl vs CK
(
e.g.Cotton_A_07947
)
Positive
Negative
Protein-Protein interaction
2.List of interested genes search:
root
stem
leaf
treat: PEG vs CK
treat: NaCl vs CK
Example:
cotton
Positive
Negative
Protein-Protein interaction
Global Network
1.One interested gene search:
(
e.g.Gh_A08G2199, Gh_A01G1737
)
Positive
Negative
Protein-Protein interaction
2.List of interested genes search:
Example:
cotton
Positive
Negative
Protein-Protein interaction
Tissue preferential analysis
1.One interested gene search:
root  
stem  
leaf  
cotyledon  
calycle  
pistil  
stamen  
petal  
torus  
ovule  
fiber  
seed  
(
e.g.Gh_A08G2199
)
Positive
Negative
Protein-Protein interaction
2.List of interested genes search:
root  
stem  
leaf  
cotyledon  
calycle  
pistil  
stamen  
petal  
torus  
ovule  
fiber  
seed  
Example:
cotton
Positive
Negative
Protein-Protein interaction
Stress differential analysis
1.One interested gene search:
PEG
Salt
Hot
Cold
     
treat: 1H
treat: 3H
treat: 6H
treat: 12H
(
e.g.Gh_A08G2199
)
Positive
Negative
Protein-Protein interaction
2.List of interested genes search:
PEG
Salt
Hot
Cold
     
treat: 1H
treat: 3H
treat: 6H
treat: 12H
Example:
cotton
Positive
Negative
Protein-Protein interaction
All copyright are reserved by
Prof. Zhen Su's
lab at China Agricultural University in 2015 | IE 10 Above and Chrome are suggested