Detail information of ctr-miR171

Basic Info
Non-coding RNA IDctr-miR171
SpeciesCitrus trifoliata
classmiRNA
Chromosome
Start Site (precursors if it is microRNA)
End Site (precursors if it is microRNA)
Strand
Length21
Assembly
Annotation
Source Gene Model
Reference
PMID: "19808935"
PMRD: plant microRNA database
Zhang, Z., Yu, J., Li, D., Liu, F., Zhou, X., Wang, T., Ling, Y. and Su, Z.
Nucleic acids research, 38, D806-813.(2010)
Sequence and structure Info

Stem-loop sequence[ctr-MIR171]

AUCGACGGUUGAAGGGGAGAGUUGUAAAAUGAAAUCAUCAAGGUAUUGGCGCGCCUCAAUUUAAAGACGUGGUUAAAUGGGCAUGAUUAGCCAUGUAUUUUCAUUGAGCCGCGUCAAUAUCUCCUUAAUUAUUUUGUAACUCUCUCCUCUAUAUCCUCGCCUUCGGUAUGCAGCUGCUCCUCGAUACAUAUGAGGAUUCAGAAACAGACAAAGGCGGUAGAAGUAAUCUUCAUCAAUAUUAUUGAAGCAGGAAACAUAACGGCAAGUUUUAAGACCCGUUUGGGGCAUGUGGGGUCUCAUUUUGAUGUUAAUGAAGUGAAAACUUGUAUUUUCCCUCAAACAUUCACUCACUCCAGGCCGGCAGGAACAAC

Secondary structure of stem-loop sequence

To make high resolution picture for your own, please download the .ps file.

Mature sequence[ctr-miR171]

UUGAGCCGCGUCAAUAUCUCC