Home
Search
ID Search
Lit-related Search
miRNA-Target Search
miRNA-Epigenomics Search
Browse
Browse ncRNA By Species
Browse ncRNA By Category
Browse ExProfile
Tools
New miRNAs Predict
Coding-potential Predict
Blast
UCSC GBrowser
GBrowser
Download
Help
Browse By Taxonomic Sorting
Browse By Alphabetic Sorting
Expand All
|
Collapse All
Eukaryota
Opisthokonta
Fungi
Dikarya
Basidiomycota
Agaricomycotina
Agaricomycetes incertae sedis
Polyporales
Ganodermataceae
Ganoderma
Ganoderma lucidum
Amoebozoa
Mycetozoa
Dictyosteliida
Dictyostelium
Dictyostelium discoideum
Viridiplantae
Chlorophyta
Chlorophyceae
Chlamydomonadales
Chlamydomonadaceae
Chlamydomonas
Chlamydomonas reinhardtii
Streptophyta
Streptophytina
Embryophyta
Bryophyta
Moss Superclass V
Bryopsida
Funariidae
Funariales
Funariaceae
Physcomitrella
Physcomitrella patens
Tracheophyta
Euphyllophyta
Spermatophyta
Acrogymnospermae
Pinidae
Cupressales
Cupressaceae
Cunninghamia lanceolata (Cunninghamia)
Coniferophyta
Coniferopsida
Coniferales
Pinaceae
Picea
Picea abies (Norway spruce)
Picea glauca (white spruce)
Picea sitchensis (Sitka spruce)
Pinus
Pinus
Pinus taeda (loblolly pine)
Pinus densata (Gaoshan pine))
Cycadophyta
Cycadopsida
Cycadales
Cycadaceae
Cycas
Cycas rumphii
Magnoliophyta
basal Magnoliophyta
Nymphaeales
Nymphaeaceae
Nuphar
Nuphar advena
eudicotyledons
Caryophyllales
Caryophyllaceae
Silene
Silene latifolia
core eudicotyledons
asterids
campanulids
Apiales
Apiineae
Araliaceae
Panax
Panax ginseng (Ginseng)
Apioideae
Scandiceae
Daucinae
Daucus
Daucus carota (carrot)
Asterales
Asteraceae
Asteroideae
Heliantheae
Helianthus
Helianthus annuus (common sunflower)
Helianthus argophyllus (silverleaf sunflower)
Helianthus ciliaris (Texas blueweed)
Helianthus exilis
Helianthus paradoxus (paradox sunflower)
Helianthus petiolaris (prairie sunflower)
Helianthus tuberosus (Jerusalem artichoke)
Zinnia
Zinnia elegans
Carduoideae
Cardueae
Carduinae
Cynara
Cynara cardunculus (Cardoon)
Cichorioideae
Cichorieae
Lactuca
Lactuca sativa (garden lettuce)
lamiids
Gentianales
Rubiaceae
Rubioideae
Spermacoceae
Hedyotis
Hedyotis centranthoides
Hedyotis terminalis
Lamiales
Oleaceae
Oleeae
Olea
Olea europaea (common olive)
Lamiaceae
Nepetoideae
Mentheae
Salvia
Salvia sclarea (Clary)
Salvia miltiorrhiza (Chinese salvia)
Lamiales incertae sedis
Rehmannia
Rehmannia glutinosa
Acanthaceae
Avicennioideae
Avicennia
Avicennia marina
Pedaliaceae
Sesamum
Sesamum indicum (sesame)
Plantaginaceae
Digitalideae
Digitalis
Digitalis purpurea (common foxglove)
Antirrhineae
Antirrhinum
Antirrhinum majus (snapdragon)
Solanales
Convolvulaceae
Ipomoeeae
Ipomoea
Ipomoea batatas (sweet potato)
Ipomoea nil (Japanese morning glory)
Solanaceae
Nicotianoideae
Nicotianeae
Nicotiana
Nicotiana benthamiana
Nicotiana sylvestris (wood tobacco)
Nicotiana tabacum (common tobacco)
Petunioideae
Petunia
Petunia x hybrida (garden petunia)
Solanoideae
Capsiceae
Capsicum
Capsicum annuum
Solaneae
Solanum
Solanum demissum
Solanum tuberosum (potato)
Lycopersicon
Solanum lycopersicum (tomato)
rosids
fabids
Cucurbitales
Cucurbitaceae
Benincaseae
Cucumis
Cucumis melo (Muskmelon)
Cucumis sativus (cucumber)
eurosids I
Fabales
Fabaceae
Papilionoideae
Dalbergieae
Arachis
Arachis hypogaea (peanut)
Fabeae
Pisum
Pisum sativum (pea)
Vicia
Vicia faba (fava bean)
Vicia sativa (spring vetch)
Sesbanieae
Sesbania
Sesbania rostrata
Genisteae
Lupinus
Lupinus luteus (yellow lupine)
Loteae
Lotus
Lotus japonicus
Phaseoleae
Glycine
Glycine clandestina (twining glycine)
Glycine max (soybean)
Glycine soja (wild soybean)
Phaseolus
Phaseolus coccineus (scarlet runner bean)
Phaseolus vulgaris (kidney bean)
Vigna
Vigna unguiculata (cowpea)
Vigna radiata (mung bean)
Trifolieae
Medicago
Medicago truncatula (barrel medic)
Medicago sativa (alfalfa)
Trifolium
Trifolium repens (white clover)
Mimosoideae
Acacieae
Acacia
Acacia auriculiformis (Earleaf acacia)
Acacia mangium (brown salwood)
Fagales
Betulaceae
Corylus
Corylus avellana (European hazelnut)
Malpighiales
Linaceae
Linum
Linum usitatissimum (Flax)
Euphorbiaceae
Acalyphoideae
Bruguiera cylindrica (bruguiera cylindrica)
Bruguiera gymnorhiza (black mangrove)
Euphorbiaceae
Acalyphoideae
Acalypheae
Ricinus
Ricinus communis (castor bean)
Crotonoideae
Micrandreae
Hevea
Hevea brasiliensis (rubber tree)
Manihoteae
Manihot
Manihot esculenta (cassava)
Salicaceae
Saliceae
Populus
Populus euphratica
Populus tremula (European aspen)
Populus tremula x Populus tremuloides
Populus tremuloides (quaking aspen)
Populus trichocarpa (western balsam poplar)
Populus trichocarpa x Populus deltoides
Populus tomentosa
Rosales
Rosaceae
Amygdaloideae
Prunus
Prunus armeniaca (apricot)
Prunus persica (peach)
Prunus salicina (Japanese plum)
Maloideae
Malus
Malus domestica (apple)
eurosids II
Brassicales
Brassicaceae
Alliaria
Alliaria petiolata (garlic mustard)
Arabidopsis
Arabidopsis arenosa
Arabidopsis cebennensis
Arabidopsis halleri
Arabidopsis lyrata
Arabidopsis thaliana (thale cress)
Arabis
Arabis hirsuta (hairy rockcress)
Barbarea
Barbarea vulgaris (winter cress)
Boechera
Boechera stricta
Brassica
Brassica napus (rape)
Brassica oleracea
Brassica rapa (field mustard)
Brassica rapa subsp. oleifera (biennial turnip rape)
Camelina
Camelina microcarpa
Capsella
Capsella rubella
Coluteocarpeae
Noccaea
Thlaspi caerulescens
Conringia
Conringia orientalis (hare's-ear mustard)
Descurainia
Descurainia sophia
Erysimum
Erysimum cheiri (wallflower)
Fourraea
Fourraea alpina
Malcolmia
Malcolmia maritima
Nasturtium
Nasturtium officinale (watercress)
Rorippa
Rorippa indica
Sibara
Sibara virginica (Virginia winged rockcress)
Thlaspi
Thlaspi arvense
Caricaceae
Carica
Carica papaya (papaya)
Malvales
Malvaceae
Byttnerioideae
Theobroma
Theobroma cacao (cacao)
Malvoideae
Gossypium
Gossypium arboreum (tree cotton)
Gossypium herbaceum (Arabian cotton)
Gossypium hirsutum (upland cotton)
Gossypium raimondii
Gossypium barbadense (sea-island cotton)
Sapindales
Rutaceae
Citrus
Citrus clementine
Citrus reticulata (tangerine)
Citrus sinensis (apfelsine)
Citrus trifoliata (trifoliate orange)
Citrus x Poncirus
Citrus x paradisi x Poncirus trifoliata
Vitales
Vitaceae
Vitis
Vitis vinifera (wine grape)
stem eudicotyledons
Ranunculales
Papaveraceae
Eschscholzioideae
Eschscholzia
Eschscholzia californica (California poppy)
Ranunculaceae
Aquilegia
Aquilegia coerulea
Liliopsida
Asparagales
Alliaceae
Allium
Allium cepa (onion)
commelinids
Arecales
Arecaceae
Arecoideae
Cocoseae
Elaeidinae
Elaeis
Elaeis guineensis (African oil palm)
Euterpeae
Oenocarpus
Oenocarpus bataua
Poales
Poaceae
BEP clade
Ehrhartoideae
Oryzeae
Oryza
Oryza barthii (African wild rice)
Oryza brachyantha
Oryza nivara
Oryza rufipogon (common wild rice)
Oryza sativa (rice)
Pooideae
Brachypodieae
Brachypodium
Brachypodium distachyon (purple false brome)
Brachypodium sylvaticum (false brome)
Poeae
Alopecurinae
Phleum
Phleum pratense (timothy grass)
Aveninae
Avena
Avena sativa (oat)
Loliinae
Festuca
Festuca arundinacea (tall fescue)
x Festulolium
Festuca glaucescens x Lolium multiflorum
Lolium
Lolium perenne (perennial ryegrass)
Triticeae
Aegilops
Aegilops speltoides
Aegilops tauschii
Australopyrum
Australopyrum velutinum
Henrardia
Henrardia persica
Heteranthelium
Heteranthelium piliferum
Hordeum
subsp. Spontaneum (wild barley)
Hordeum vulgare subsp. Vulgare (domesticated barley)
Peridictyon
Peridictyon sanctum
Triticum
Triticum aestivum (bread wheat)
Triticum monococcum (einkorn wheat)
Triticum turgidum (poulard whea)
Triticum urartu
Secale
Secale cereale (rye)
PACMAD clade
Panicoideae
Andropogoneae
Saccharum
Saccharum spp.
Saccharum officinarum complex
Saccharum officinarum (noble cane)
Sorghum
Sorghum bicolor (sorghum)
Sorghum propinquum
Zea
Zea mays (maize)
Paniceae
Panicum
Panicum virgatum (switchgrass)
Pennisetum
Pennisetum ciliare
Pennisetum glaucum (pearl millet)
Setaria
Setaria italica (foxtail millet)
magnoliids
Laurales
Lauraceae
Persea
Persea americana (avocado)
Magnoliales
Annonaceae
Annona
Annona cherimola (cherimoya)
Magnoliaceae
Liriodendron
Liriodendron tulipifera
Lycopodiophyta
Isoetopsida
Selaginellales
Selaginellaceae
Selaginella
Selaginella moellendorffii
unclassified eukaryotes
mixed EST libraries
Schedonorus arundinaceus
A
Acacia auriculiformis (Earleaf acacia)
Acacia mangium (brown salwood)
Aegilops speltoides
Aegilops tauschii
Alliaria petiolata (garlic mustard)
Allium cepa (onion)
Annona cherimola (cherimoya)
Antirrhinum majus (snapdragon)
Aquilegia coerulea
Arabidopsis arenosa
Arabidopsis cebennensis
Arabidopsis halleri
Arabidopsis lyrata
Arabidopsis thaliana (thale cress)
Arabis hirsuta (hairy rockcress)
Arachis hypogaea (peanut)
Australopyrum velutinum
Avena sativa (oat)
Avicennia marina
B
Barbarea vulgaris (winter cress)
Boechera stricta
Brachypodium distachyon (purple false brome)
Brachypodium sylvaticum (false brome)
Brassica napus (rape)
Brassica oleracea
Brassica rapa (field mustard)
Bruguiera cylindrica (bruguiera cylindrica)
Bruguiera gymnorhiza (black mangrove)
C
Camelina microcarpa
Capsella rubella
Capsicum annuum
Carica papaya (papaya)
Chlamydomonas reinhardtii
Citrus clementine
Citrus reticulata (tangerine)
Citrus sinensis (apfelsine)
Citrus trifoliata (trifoliate orange)
Citrus x paradisi x Poncirus trifoliata
Conringia orientalis (hare's-ear mustard)
Corylus avellana (European hazelnut)
Cucumis melo (Muskmelon)
Cunninghamia lanceolata (Cunninghamia)
Cycas rumphii
Cynara cardunculus (Cardoon)
D
Descurainia sophia
Dictyostelium discoideum
Digitalis purpurea (common foxglove)
E
Elaeis guineensis (African oil palm)
Erysimum cheiri (wallflower)
Eschscholzia californica (California poppy)
F
Festuca arundinacea (tall fescue)
Festuca glaucescens x Lolium multiflorum
Fourraea alpina
G
Glycine clandestina (twining glycine)
Glycine max (soybean)
Glycine soja (wild soybean)
Gossypium arboreum (tree cotton)
Gossypium herbaceum (Arabian cotton)
Gossypium hirsutum (upland cotton)
Gossypium raimondii
H
Hedyotis centranthoides
Hedyotis terminalis
Helianthus annuus (common sunflower)
Helianthus argophyllus (silverleaf sunflower)
Helianthus ciliaris (Texas blueweed)
Helianthus exilis
Helianthus paradoxus (paradox sunflower)
Helianthus petiolaris (prairie sunflower)
Helianthus tuberosus (Jerusalem artichoke)
Henrardia persica
Heteranthelium piliferum
Hevea brasiliensis (rubber tree)
Hordeum vulgare subsp. Spontaneum (wild barley)
Hordeum vulgare subsp. Vulgare (domesticated barley)
I
Ipomoea batatas (sweet potato)
Ipomoea nil (Japanese morning glory)
L
Lactuca sativa (garden lettuce)
Linum usitatissimum (Flax)
Liriodendron tulipifera
Lotus japonicus
Lupinus luteus (yellow lupine)
M
Malcolmia maritima
Malus domestica (apple)
Manihot esculenta (cassava)
Medicago truncatula (barrel medic)
N
Nasturtium officinale (watercress)
Nicotiana benthamiana
Nicotiana sylvestris (wood tobacco)
Nicotiana tabacum (common tobacco)
Nuphar advena
O
Oenocarpus bataua
Olea europaea (common olive)
Oryza barthii (African wild rice)
Oryza brachyantha
Oryza nivara
Oryza rufipogon (common wild rice)
Oryza sativa (rice)
P
Panax ginseng (Ginseng)
Panicum virgatum (switchgrass)
Pennisetum ciliare
Pennisetum glaucum (pearl millet)
Peridictyon sanctum
Persea americana (avocado)
Petunia x hybrida (garden petunia)
Phaseolus coccineus (scarlet runner bean)
Phaseolus vulgaris (kidney bean)
Phleum pratense (timothy grass)
Physcomitrella patens
Picea abies (Norway spruce)
Picea glauca (white spruce)
Picea sitchensis (Sitka spruce)
Pinus densata (Gaoshan pine))
Pinus taeda (loblolly pine)
Populus euphratica
Populus tremula x Populus tremuloides
Populus tremula (European aspen)
Populus tremuloides (quaking aspen)
Populus trichocarpa x Populus deltoides
Populus trichocarpa (western balsam poplar)
Prunus armeniaca (apricot)
Prunus persica (peach)
Prunus salicina (Japanese plum)
R
Rehmannia glutinosa
Ricinus communis (castor bean)
Rorippa indica
S
Saccharum officinarum (noble cane)
Saccharum spp.
Salvia sclarea (Clary)
Schedonorus arundinaceus
Secale cereale (rye)
Selaginella moellendorffii
Sesamum indicum (sesame)
Setaria italica (foxtail millet)
Sibara virginica (Virginia winged rockcress)
Solanum demissum
Solanum lycopersicum (tomato)
Solanum tuberosum (potato)
Sorghum bicolor (sorghum)
Sorghum propinquum
T
Theobroma cacao (cacao)
Thlaspi arvense
Trifolium repens (white clover)
Triticum aestivum (bread wheat)
Triticum monococcum (einkorn wheat)
Triticum turgidum (poulard whea)
Triticum urartu
V
Vigna unguiculata (cowpea)
Vitis vinifera (wine grape)
Z
Zea mays (maize)
Zinnia elegans