We presented here a platform of multidimensional
omics data (ChIP-seq and RNA-seq) analysis results using both public and in-house datasets and published toolkits. The analytical pipeline were designed by ourselves and applied to
two cotton species, upland cotton (Gossypium hirsutum L.) and Asiatic cotton (Gossypium arboreum L.). The designed pipeline for our omics data of cotton
are shown below.
Qi You, Xin Yi, Kang Zhang, Chunchao Wang, Xuelian Ma, Xueyan Zhang, Wenying Xu, Fuguang Li, Zhen Su. (2017) Genome-wide comparative analysis of H3K4me3 profiles between diploid and allotetraploid cotton to refine genome annotation.
Scientific Reports. 7:9098.[Link]
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